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feature: add correlation for series
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36127a6332
commit
1e31c4fb04
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@ -643,4 +643,94 @@ func Stdev(a Series, length int) float64 {
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return math.Sqrt(s / float64(length))
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}
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type CorrFunc func(Series, Series, int) float64
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func Kendall(a, b Series, length int) float64 {
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if a.Length() < length {
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length = a.Length()
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}
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if b.Length() < length {
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length = b.Length()
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}
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aRanks := Rank(a, length)
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bRanks := Rank(b, length)
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concordant, discordant := 0, 0
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for i := 0; i < length; i++ {
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for j := i + 1; j < length; j++ {
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value := (aRanks.Index(i) - aRanks.Index(j)) * (bRanks.Index(i) - bRanks.Index(j))
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if value > 0 {
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concordant++
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} else {
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discordant++
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}
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}
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}
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return float64(concordant-discordant) * 2.0 / float64(length*(length-1))
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}
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func Rank(a Series, length int) Series {
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if length > a.Length() {
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length = a.Length()
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}
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rank := make([]float64, length)
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mapper := make([]float64, length+1)
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for i := length - 1; i >= 0; i-- {
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ii := a.Index(i)
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counter := 0.
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for j := 0; j < length; j++ {
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if a.Index(j) <= ii {
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counter += 1.
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}
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}
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rank[i] = counter
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mapper[int(counter)] += 1.
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}
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output := NewQueue(length)
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for i := length - 1; i >= 0; i-- {
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output.Update(rank[i] - (mapper[int(rank[i])]-1.)/2)
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}
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return output
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}
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func Pearson(a, b Series, length int) float64 {
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if a.Length() < length {
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length = a.Length()
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}
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if b.Length() < length {
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length = b.Length()
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}
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x := make([]float64, length)
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y := make([]float64, length)
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for i := 0; i < length; i++ {
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x[i] = a.Index(i)
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y[i] = b.Index(i)
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}
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return stat.Correlation(x, y, nil)
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}
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func Spearman(a, b Series, length int) float64 {
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if a.Length() < length {
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length = a.Length()
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}
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if b.Length() < length {
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length = b.Length()
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}
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aRank := Rank(a, length)
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bRank := Rank(b, length)
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return Pearson(aRank, bRank, length)
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}
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// similar to pandas.Series.corr() function.
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//
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// method could either be `types.Pearson`, `types.Spearman` or `types.Kendall`
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func Correlation(a Series, b Series, length int, method ...CorrFunc) float64 {
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var runner CorrFunc
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if len(method) == 0 {
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runner = Pearson
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} else {
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runner = method[0]
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}
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return runner(a, b, length)
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}
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// TODO: ta.linreg
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@ -33,3 +33,26 @@ func TestFloat64Slice(t *testing.T) {
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b = append(b, 3.0)
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assert.Equal(t, c.Last(), 1.)
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}
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/*
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python
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import pandas as pd
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s1 = pd.Series([.2, 0., .6, .2, .2])
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s2 = pd.Series([.3, .6, .0, .1])
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print(s1.corr(s2, method='pearson'))
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print(s1.corr(s2, method='spearman')
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print(s1.corr(s2, method='kendall'))
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print(s1.rank())
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*/
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func TestCorr(t *testing.T) {
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var a = Float64Slice{.2, .0, .6, .2}
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var b = Float64Slice{.3, .6, .0, .1}
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corr := Correlation(&a, &b, 4, Pearson)
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assert.InDelta(t, corr, -0.8510644, 0.001)
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out := Rank(&a, 4)
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assert.Equal(t, out.Index(0), 2.5)
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assert.Equal(t, out.Index(1), 4.0)
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corr = Correlation(&a, &b, 4, Spearman)
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assert.InDelta(t, corr, -0.94868, 0.001)
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}
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